Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx1Q8C8B0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm13996-201ENSMUST00000118456 430 ntBASIC14.47□□□□□ -0.09
Alx1Q8C8B0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Alx1Q8C8B0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm11989-201ENSMUST00000117240 672 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm11362-201ENSMUST00000118838 850 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm15808-201ENSMUST00000119046 604 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx1Q8C8B0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Alx1Q8C8B0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx1Q8C8B0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Alx1Q8C8B0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx1Q8C8B0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms