Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm10288-201ENSMUST00000084614 537 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scaf8Q6DID3 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm13182-201ENSMUST00000122241 312 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm23218-201ENSMUST00000158124 276 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm28388-201ENSMUST00000186262 437 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm19540-201ENSMUST00000221843 810 ntBASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.58□□□□□ -0.08
Scaf8Q6DID3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm1848-201ENSMUST00000120711 789 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm9022-201ENSMUST00000182482 992 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm8100-201ENSMUST00000182906 988 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm8502-201ENSMUST00000185708 901 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm18304-201ENSMUST00000189162 546 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm8510-201ENSMUST00000189202 895 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm2316-201ENSMUST00000190613 921 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm37002-201ENSMUST00000194560 373 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm8679-201ENSMUST00000210651 1036 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms