Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gm13316-201ENSMUST00000140537 691 ntBASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gm44958-201ENSMUST00000203734 736 ntBASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gm44882-201ENSMUST00000205702 802 ntBASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gm9083-201ENSMUST00000120423 819 ntBASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gm19309-201ENSMUST00000218295 205 ntBASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkl5Q3UTQ8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cdkl5Q3UTQ8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm8062-201ENSMUST00000139696 444 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Mospd4-201ENSMUST00000180618 576 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm42627-201ENSMUST00000197347 224 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm45880-201ENSMUST00000213041 853 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm39404-201ENSMUST00000216350 313 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkl5Q3UTQ8 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms