Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm13916-201ENSMUST00000117368 628 ntBASIC12.53□□□□□ -0.4
Rp1P56716 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm4726-201ENSMUST00000135604 736 ntBASIC12.53□□□□□ -0.4
Rp1P56716 Gm6019-201ENSMUST00000148369 736 ntBASIC12.53□□□□□ -0.4
Rp1P56716 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.53□□□□□ -0.4
Rp1P56716 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.53□□□□□ -0.4
Rp1P56716 Gm43520-201ENSMUST00000197996 164 ntBASIC12.53□□□□□ -0.4
Rp1P56716 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.53□□□□□ -0.4
Rp1P56716 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.53□□□□□ -0.4
Rp1P56716 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Rp1P56716 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rp1P56716 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rp1P56716 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rp1P56716 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.52□□□□□ -0.4
Rp1P56716 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.52□□□□□ -0.4
Rp1P56716 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.52□□□□□ -0.4
Rp1P56716 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.52□□□□□ -0.4
Rp1P56716 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Gm9463-201ENSMUST00000206707 601 ntBASIC12.52□□□□□ -0.4
Rp1P56716 Gm2553-201ENSMUST00000215986 605 ntBASIC12.52□□□□□ -0.4
Rp1P56716 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.52□□□□□ -0.4
Rp1P56716 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rp1P56716 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rp1P56716 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rp1P56716 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rp1P56716 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.52□□□□□ -0.4
Rp1P56716 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.52□□□□□ -0.41
Rp1P56716 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rp1P56716 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rp1P56716 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rp1P56716 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.52□□□□□ -0.41
Rp1P56716 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Rp1P56716 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rp1P56716 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rp1P56716 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rp1P56716 Gm7666-201ENSMUST00000146631 819 ntBASIC12.52□□□□□ -0.41
Rp1P56716 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Rp1P56716 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.52□□□□□ -0.41
Rp1P56716 Gm19287-201ENSMUST00000203190 358 ntBASIC12.52□□□□□ -0.41
Rp1P56716 Gm6867-201ENSMUST00000219165 425 ntBASIC12.52□□□□□ -0.41
Rp1P56716 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rp1P56716 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rp1P56716 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rp1P56716 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.51□□□□□ -0.41
Rp1P56716 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rp1P56716 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rp1P56716 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms