Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm11450-201ENSMUST00000121144 333 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Gm11978-201ENSMUST00000122315 466 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm7666-201ENSMUST00000146631 819 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.38□□□□□ -0.43
Atxn1P54254 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.38□□□□□ -0.43
Atxn1P54254 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Atxn1P54254 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.38□□□□□ -0.43
Atxn1P54254 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Atxn1P54254 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atxn1P54254 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Gm12165-201ENSMUST00000117047 342 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Gm17391-201ENSMUST00000171036 126 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Atxn1P54254 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.37□□□□□ -0.43
Atxn1P54254 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.37□□□□□ -0.43
Atxn1P54254 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms