Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.64□□□□□ -0.39
Vps4bP46467 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps4bP46467 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.64□□□□□ -0.39
Vps4bP46467 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps4bP46467 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Daam2-202ENSMUST00000224595 1926 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm37424-201ENSMUST00000191727 561 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Gm43179-201ENSMUST00000198797 275 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm9257-201ENSMUST00000221254 232 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.63□□□□□ -0.39
Vps4bP46467 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps4bP46467 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Gm15198-201ENSMUST00000117283 177 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps4bP46467 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Gm7561-201ENSMUST00000211203 886 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vps4bP46467 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Gm8227-201ENSMUST00000223306 571 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Gm6091-201ENSMUST00000098307 165 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.62□□□□□ -0.39
Vps4bP46467 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Vps4bP46467 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps4bP46467 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps4bP46467 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms