Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox5P35710 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.57□□□□□ -0.24
Sox5P35710 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sox5P35710 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox5P35710 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.57□□□□□ -0.24
Sox5P35710 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Sox5P35710 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Gm5356-201ENSMUST00000093326 615 ntBASIC13.57□□□□□ -0.24
Sox5P35710 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.57□□□□□ -0.24
Sox5P35710 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox5P35710 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sox5P35710 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.56□□□□□ -0.24
Sox5P35710 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox5P35710 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox5P35710 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Sox5P35710 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sox5P35710 Gm11814-201ENSMUST00000119515 929 ntBASIC13.56□□□□□ -0.24
Sox5P35710 Gm11597-201ENSMUST00000121423 964 ntBASIC13.56□□□□□ -0.24
Sox5P35710 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox5P35710 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.56□□□□□ -0.24
Sox5P35710 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.56□□□□□ -0.24
Sox5P35710 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.56□□□□□ -0.24
Sox5P35710 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sox5P35710 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sox5P35710 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox5P35710 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox5P35710 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox5P35710 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox5P35710 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox5P35710 Gm6745-201ENSMUST00000199216 526 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Gm17794-201ENSMUST00000220252 955 ntBASIC13.55□□□□□ -0.24
Sox5P35710 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms