Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Thbs1P35441 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Thbs1P35441 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.57□□□□□ -0.56
Thbs1P35441 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.57□□□□□ -0.56
Thbs1P35441 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs1P35441 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thbs1P35441 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.56□□□□□ -0.56
Thbs1P35441 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thbs1P35441 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thbs1P35441 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thbs1P35441 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm27514-201ENSMUST00000183692 110 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Gm38216-201ENSMUST00000194872 1214 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Gm40466-201ENSMUST00000212174 422 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.56□□□□□ -0.56
Thbs1P35441 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Thbs1P35441 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs1P35441 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.56□□□□□ -0.56
Thbs1P35441 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.55□□□□□ -0.56
Thbs1P35441 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.55□□□□□ -0.56
Thbs1P35441 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Gm27243-201ENSMUST00000183964 521 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Gm8227-201ENSMUST00000223306 571 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Thbs1P35441 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms