Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10□□□□□ -0.81
Chd6A3KFM7 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC10□□□□□ -0.81
Chd6A3KFM7 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10□□□□□ -0.81
Chd6A3KFM7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10□□□□□ -0.81
Chd6A3KFM7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chd6A3KFM7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm14807-201ENSMUST00000116640 983 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Gm13315-201ENSMUST00000120376 991 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10□□□□□ -0.81
Chd6A3KFM7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chd6A3KFM7 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm42937-201ENSMUST00000197360 752 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chd6A3KFM7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Chd6A3KFM7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm11960-202ENSMUST00000181063 2858 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm23272-201ENSMUST00000104053 129 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm11544-201ENSMUST00000120215 382 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm27826-201ENSMUST00000175282 255 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm42430-201ENSMUST00000197209 616 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm15815-201ENSMUST00000120569 255 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm24328-201ENSMUST00000175104 67 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm2566-201ENSMUST00000201267 431 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Mir341-201ENSMUST00000093593 96 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.99□□□□□ -0.81
Chd6A3KFM7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms