Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.52■□□□□ 0.4
Rcl1Q9JJT0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rcl1Q9JJT0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rcl1Q9JJT0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rcl1Q9JJT0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rcl1Q9JJT0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
Rcl1Q9JJT0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rcl1Q9JJT0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rcl1Q9JJT0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.45■□□□□ 0.38
Rcl1Q9JJT0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rcl1Q9JJT0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rcl1Q9JJT0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rcl1Q9JJT0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rcl1Q9JJT0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rcl1Q9JJT0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rcl1Q9JJT0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rcl1Q9JJT0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms