Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rhox4bQ9JI43 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rhox4bQ9JI43 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rhox4bQ9JI43 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rhox4bQ9JI43 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Gm9812-201ENSMUST00000061934 968 ntBASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rhox4bQ9JI43 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rhox4bQ9JI43 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.67■□□□□ 0.26
Rhox4bQ9JI43 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Gm4799-201ENSMUST00000095396 657 ntBASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rhox4bQ9JI43 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rhox4bQ9JI43 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rhox4bQ9JI43 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rhox4bQ9JI43 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.64■□□□□ 0.25
Rhox4bQ9JI43 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms