Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubb3Q9ERD7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubb3Q9ERD7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Tubb3Q9ERD7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
Tubb3Q9ERD7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubb3Q9ERD7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.69■□□□□ 0.9
Tubb3Q9ERD7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tubb3Q9ERD7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubb3Q9ERD7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tubb3Q9ERD7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb3Q9ERD7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tubb3Q9ERD7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb3Q9ERD7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb3Q9ERD7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb3Q9ERD7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubb3Q9ERD7 Rps24-207ENSMUST00000224568 714 ntBASIC20.64■□□□□ 0.89
Tubb3Q9ERD7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Tubb3Q9ERD7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb3Q9ERD7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms