Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.33■□□□□ 0.52
Mmp1bQ9EPL6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1bQ9EPL6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1bQ9EPL6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.33■□□□□ 0.52
Mmp1bQ9EPL6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1bQ9EPL6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1bQ9EPL6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1bQ9EPL6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp1bQ9EPL6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1bQ9EPL6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1bQ9EPL6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mmp1bQ9EPL6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1bQ9EPL6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1bQ9EPL6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1bQ9EPL6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp1bQ9EPL6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp1bQ9EPL6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Gm27502-201ENSMUST00000183495 199 ntBASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp1bQ9EPL6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp1bQ9EPL6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.24■□□□□ 0.51
Mmp1bQ9EPL6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms