Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Gm22238-201ENSMUST00000175222 88 ntBASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rita1Q9D1H0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rita1Q9D1H0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rita1Q9D1H0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rita1Q9D1H0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rita1Q9D1H0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rita1Q9D1H0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rita1Q9D1H0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rita1Q9D1H0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rita1Q9D1H0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rita1Q9D1H0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rita1Q9D1H0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rita1Q9D1H0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rita1Q9D1H0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rita1Q9D1H0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rita1Q9D1H0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rita1Q9D1H0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rita1Q9D1H0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rita1Q9D1H0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rita1Q9D1H0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rita1Q9D1H0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rita1Q9D1H0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rita1Q9D1H0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rita1Q9D1H0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rita1Q9D1H0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rita1Q9D1H0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rita1Q9D1H0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.27■□□□□ 0.68
Rita1Q9D1H0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
Rita1Q9D1H0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rita1Q9D1H0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rita1Q9D1H0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.27■□□□□ 0.67
Rita1Q9D1H0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rita1Q9D1H0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.26■□□□□ 0.67
Rita1Q9D1H0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rita1Q9D1H0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.26■□□□□ 0.67
Rita1Q9D1H0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.26■□□□□ 0.67
Rita1Q9D1H0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rita1Q9D1H0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rita1Q9D1H0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms