Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot11Q9CWN7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot11Q9CWN7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.29■□□□□ 0.84
Cnot11Q9CWN7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.29■□□□□ 0.84
Cnot11Q9CWN7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot11Q9CWN7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot11Q9CWN7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Cnot11Q9CWN7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cnot11Q9CWN7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cnot11Q9CWN7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cnot11Q9CWN7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot11Q9CWN7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot11Q9CWN7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot11Q9CWN7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.23■□□□□ 0.83
Cnot11Q9CWN7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cnot11Q9CWN7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot11Q9CWN7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot11Q9CWN7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cnot11Q9CWN7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot11Q9CWN7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot11Q9CWN7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.2■□□□□ 0.82
Cnot11Q9CWN7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot11Q9CWN7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cnot11Q9CWN7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cnot11Q9CWN7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms