Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt88Q9CPR6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt88Q9CPR6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.76■□□□□ 0.59
Krt88Q9CPR6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.75■□□□□ 0.59
Krt88Q9CPR6 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.75■□□□□ 0.59
Krt88Q9CPR6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt88Q9CPR6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt88Q9CPR6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Krt88Q9CPR6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt88Q9CPR6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Krt88Q9CPR6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.71■□□□□ 0.59
Krt88Q9CPR6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Krt88Q9CPR6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt88Q9CPR6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Krt88Q9CPR6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.7■□□□□ 0.58
Krt88Q9CPR6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt88Q9CPR6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt88Q9CPR6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms