Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a3Q921V7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Slc44a3Q921V7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a3Q921V7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a3Q921V7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc44a3Q921V7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slc44a3Q921V7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc44a3Q921V7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.64■□□□□ 0.9
Slc44a3Q921V7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a3Q921V7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a3Q921V7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a3Q921V7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a3Q921V7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Slc44a3Q921V7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a3Q921V7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a3Q921V7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a3Q921V7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a3Q921V7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slc44a3Q921V7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.62■□□□□ 0.89
Slc44a3Q921V7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a3Q921V7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a3Q921V7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a3Q921V7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a3Q921V7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a3Q921V7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a3Q921V7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a3Q921V7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Slc44a3Q921V7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
Slc44a3Q921V7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a3Q921V7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a3Q921V7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Slc44a3Q921V7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a3Q921V7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.56■□□□□ 0.88
Slc44a3Q921V7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc44a3Q921V7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a3Q921V7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms