Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.87■■□□□ 1.09
Pcdha3Q91Y16 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha3Q91Y16 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha3Q91Y16 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha3Q91Y16 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha3Q91Y16 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha3Q91Y16 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha3Q91Y16 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdha3Q91Y16 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha3Q91Y16 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdha3Q91Y16 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha3Q91Y16 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha3Q91Y16 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha3Q91Y16 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha3Q91Y16 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Pcdha3Q91Y16 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha3Q91Y16 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdha3Q91Y16 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha3Q91Y16 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Pcdha3Q91Y16 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.82■■□□□ 1.08
Pcdha3Q91Y16 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha3Q91Y16 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha3Q91Y16 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha3Q91Y16 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha3Q91Y16 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Rps24-207ENSMUST00000224568 714 ntBASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha3Q91Y16 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha3Q91Y16 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha3Q91Y16 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdha3Q91Y16 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha3Q91Y16 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha3Q91Y16 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha3Q91Y16 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms