Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb17Q91VD8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb17Q91VD8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb17Q91VD8 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.64■■□□□ 1.06
Pcdhb17Q91VD8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb17Q91VD8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb17Q91VD8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhb17Q91VD8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb17Q91VD8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb17Q91VD8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdhb17Q91VD8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhb17Q91VD8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb17Q91VD8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb17Q91VD8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb17Q91VD8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb17Q91VD8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb17Q91VD8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb17Q91VD8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb17Q91VD8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Etf1-202ENSMUST00000180351 108 ntBASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
Pcdhb17Q91VD8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb17Q91VD8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb17Q91VD8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.58■■□□□ 1.05
Pcdhb17Q91VD8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb17Q91VD8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb17Q91VD8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.58■■□□□ 1.04
Pcdhb17Q91VD8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb17Q91VD8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb17Q91VD8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb17Q91VD8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb17Q91VD8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb17Q91VD8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb17Q91VD8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb17Q91VD8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb17Q91VD8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.53■■□□□ 1.04
Pcdhb17Q91VD8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb17Q91VD8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb17Q91VD8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb17Q91VD8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb17Q91VD8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb17Q91VD8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.51■■□□□ 1.03
Pcdhb17Q91VD8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms