Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H1fooQ8VIK3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H1fooQ8VIK3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms