Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssx2ipQ8VC66 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx2ipQ8VC66 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Gm43566-201ENSMUST00000196851 808 ntBASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx2ipQ8VC66 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Gm15546-201ENSMUST00000122095 826 ntBASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx2ipQ8VC66 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.25■□□□□ 0.99
Ssx2ipQ8VC66 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx2ipQ8VC66 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx2ipQ8VC66 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx2ipQ8VC66 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx2ipQ8VC66 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx2ipQ8VC66 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx2ipQ8VC66 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Gm13238-201ENSMUST00000117655 780 ntBASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ssx2ipQ8VC66 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx2ipQ8VC66 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ssx2ipQ8VC66 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx2ipQ8VC66 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx2ipQ8VC66 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx2ipQ8VC66 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms