Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Brd8Q8R3B7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brd8Q8R3B7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Brd8Q8R3B7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Brd8Q8R3B7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brd8Q8R3B7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.34■■□□□ 1.01
Brd8Q8R3B7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brd8Q8R3B7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Brd8Q8R3B7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.33■■□□□ 1
Brd8Q8R3B7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Brd8Q8R3B7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brd8Q8R3B7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Brd8Q8R3B7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brd8Q8R3B7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brd8Q8R3B7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.32■■□□□ 1
Brd8Q8R3B7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.32■■□□□ 1
Brd8Q8R3B7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.31■■□□□ 1
Brd8Q8R3B7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Brd8Q8R3B7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Brd8Q8R3B7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.3■■□□□ 1
Brd8Q8R3B7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd8Q8R3B7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd8Q8R3B7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.29■■□□□ 1
Brd8Q8R3B7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Brd8Q8R3B7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.29■■□□□ 1
Brd8Q8R3B7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd8Q8R3B7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.29■■□□□ 1
Brd8Q8R3B7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.29■■□□□ 1
Brd8Q8R3B7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.29■■□□□ 1
Brd8Q8R3B7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Brd8Q8R3B7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.29■■□□□ 1
Brd8Q8R3B7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd8Q8R3B7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd8Q8R3B7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd8Q8R3B7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.27■■□□□ 1
Brd8Q8R3B7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.27■■□□□ 1
Brd8Q8R3B7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.26■□□□□ 0.99
Brd8Q8R3B7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brd8Q8R3B7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd8Q8R3B7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd8Q8R3B7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.24■□□□□ 0.99
Brd8Q8R3B7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.24■□□□□ 0.99
Brd8Q8R3B7 Gm22238-201ENSMUST00000175222 88 ntBASIC21.24■□□□□ 0.99
Brd8Q8R3B7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd8Q8R3B7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms