Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a2Q8CA03 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a2Q8CA03 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a2Q8CA03 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a2Q8CA03 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc46a2Q8CA03 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc46a2Q8CA03 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc46a2Q8CA03 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc46a2Q8CA03 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc46a2Q8CA03 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc46a2Q8CA03 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc46a2Q8CA03 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.02■□□□□ 0.8
Slc46a2Q8CA03 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc46a2Q8CA03 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Slc46a2Q8CA03 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc46a2Q8CA03 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc46a2Q8CA03 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Slc46a2Q8CA03 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Mir6538-201ENSMUST00000183713 110 ntBASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc46a2Q8CA03 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Slc46a2Q8CA03 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc46a2Q8CA03 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms