Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a6Q8C6K9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.02■□□□□ 0.64
Col6a6Q8C6K9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.02■□□□□ 0.64
Col6a6Q8C6K9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a6Q8C6K9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a6Q8C6K9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Col6a6Q8C6K9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.02■□□□□ 0.63
Col6a6Q8C6K9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Col6a6Q8C6K9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Gm27405-201ENSMUST00000184201 112 ntBASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Col6a6Q8C6K9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19■□□□□ 0.63
Col6a6Q8C6K9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Gm8493-201ENSMUST00000196881 489 ntBASIC19■□□□□ 0.63
Col6a6Q8C6K9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col6a6Q8C6K9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Gm42699-201ENSMUST00000198104 1657 ntBASIC19■□□□□ 0.63
Col6a6Q8C6K9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a6Q8C6K9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.99■□□□□ 0.63
Col6a6Q8C6K9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.99■□□□□ 0.63
Col6a6Q8C6K9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a6Q8C6K9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.99■□□□□ 0.63
Col6a6Q8C6K9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.98■□□□□ 0.63
Col6a6Q8C6K9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.97■□□□□ 0.63
Col6a6Q8C6K9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Gm9870-201ENSMUST00000063874 645 ntBASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.96■□□□□ 0.63
Col6a6Q8C6K9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a6Q8C6K9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.94■□□□□ 0.62
Col6a6Q8C6K9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.94■□□□□ 0.62
Col6a6Q8C6K9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a6Q8C6K9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.94■□□□□ 0.62
Col6a6Q8C6K9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Col6a6Q8C6K9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a6Q8C6K9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms