Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf3Q8C120 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf3Q8C120 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3rf3Q8C120 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3rf3Q8C120 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.77■■□□□ 1.08
Sh3rf3Q8C120 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
Sh3rf3Q8C120 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf3Q8C120 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf3Q8C120 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf3Q8C120 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf3Q8C120 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf3Q8C120 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf3Q8C120 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf3Q8C120 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf3Q8C120 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf3Q8C120 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf3Q8C120 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf3Q8C120 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf3Q8C120 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf3Q8C120 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf3Q8C120 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf3Q8C120 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf3Q8C120 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf3Q8C120 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf3Q8C120 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf3Q8C120 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.67■■□□□ 1.06
Sh3rf3Q8C120 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf3Q8C120 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf3Q8C120 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms