Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Suds3Q8BR65 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Suds3Q8BR65 Gm43566-201ENSMUST00000196851 808 ntBASIC21.3■■□□□ 1
Suds3Q8BR65 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Suds3Q8BR65 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Suds3Q8BR65 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.3■■□□□ 1
Suds3Q8BR65 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.29■■□□□ 1
Suds3Q8BR65 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Suds3Q8BR65 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.28■■□□□ 1
Suds3Q8BR65 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.28■■□□□ 1
Suds3Q8BR65 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.28■■□□□ 1
Suds3Q8BR65 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Suds3Q8BR65 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Suds3Q8BR65 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Suds3Q8BR65 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Suds3Q8BR65 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Suds3Q8BR65 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Suds3Q8BR65 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.27■■□□□ 1
Suds3Q8BR65 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
Suds3Q8BR65 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Suds3Q8BR65 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Suds3Q8BR65 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Suds3Q8BR65 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Suds3Q8BR65 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Suds3Q8BR65 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Suds3Q8BR65 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Suds3Q8BR65 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.24■□□□□ 0.99
Suds3Q8BR65 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.24■□□□□ 0.99
Suds3Q8BR65 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Suds3Q8BR65 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Suds3Q8BR65 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Suds3Q8BR65 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Suds3Q8BR65 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Suds3Q8BR65 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.22■□□□□ 0.99
Suds3Q8BR65 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Suds3Q8BR65 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Suds3Q8BR65 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Suds3Q8BR65 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Suds3Q8BR65 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Suds3Q8BR65 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Suds3Q8BR65 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Suds3Q8BR65 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Suds3Q8BR65 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Suds3Q8BR65 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms