Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nhlrc1Q8BR37 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.14■□□□□ 0.17
Nhlrc1Q8BR37 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhlrc1Q8BR37 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 Gm12821-201ENSMUST00000120022 600 ntBASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.12■□□□□ 0.17
Nhlrc1Q8BR37 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nhlrc1Q8BR37 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhlrc1Q8BR37 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Gm21956-201ENSMUST00000179946 522 ntBASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhlrc1Q8BR37 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nhlrc1Q8BR37 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nhlrc1Q8BR37 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nhlrc1Q8BR37 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nhlrc1Q8BR37 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nhlrc1Q8BR37 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhlrc1Q8BR37 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nhlrc1Q8BR37 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Nhlrc1Q8BR37 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.07■□□□□ 0.16
Nhlrc1Q8BR37 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.07■□□□□ 0.16
Nhlrc1Q8BR37 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.07■□□□□ 0.16
Nhlrc1Q8BR37 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Notumos-201ENSMUST00000151998 2659 ntBASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Golgb1-201ENSMUST00000023534 498 ntBASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nhlrc1Q8BR37 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhlrc1Q8BR37 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms