Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf144bQ8BKD6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf144bQ8BKD6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf144bQ8BKD6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf144bQ8BKD6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Rnf144bQ8BKD6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf144bQ8BKD6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.7■□□□□ 0.42
Rnf144bQ8BKD6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf144bQ8BKD6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf144bQ8BKD6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf144bQ8BKD6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf144bQ8BKD6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms