Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.11■■□□□ 1.45
Prpf40bQ80W14 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf40bQ80W14 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.09■■□□□ 1.45
Prpf40bQ80W14 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.09■■□□□ 1.45
Prpf40bQ80W14 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.08■■□□□ 1.45
Prpf40bQ80W14 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.45
Prpf40bQ80W14 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.08■■□□□ 1.45
Prpf40bQ80W14 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Prpf40bQ80W14 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Prpf40bQ80W14 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf40bQ80W14 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Prpf40bQ80W14 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Prpf40bQ80W14 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Prpf40bQ80W14 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Prpf40bQ80W14 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Prpf40bQ80W14 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Prpf40bQ80W14 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf40bQ80W14 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf40bQ80W14 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf40bQ80W14 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf40bQ80W14 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.02■■□□□ 1.44
Prpf40bQ80W14 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Prpf40bQ80W14 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Prpf40bQ80W14 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Prpf40bQ80W14 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.01■■□□□ 1.43
Prpf40bQ80W14 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
Prpf40bQ80W14 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf40bQ80W14 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24■■□□□ 1.43
Prpf40bQ80W14 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24■■□□□ 1.43
Prpf40bQ80W14 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf40bQ80W14 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24■■□□□ 1.43
Prpf40bQ80W14 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf40bQ80W14 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf40bQ80W14 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf40bQ80W14 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40bQ80W14 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms