Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scn4bQ7M729 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Scn4bQ7M729 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.36■□□□□ 0.85
Scn4bQ7M729 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.36■□□□□ 0.85
Scn4bQ7M729 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn4bQ7M729 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn4bQ7M729 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scn4bQ7M729 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn4bQ7M729 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn4bQ7M729 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn4bQ7M729 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.33■□□□□ 0.85
Scn4bQ7M729 Gm43566-201ENSMUST00000196851 808 ntBASIC20.33■□□□□ 0.85
Scn4bQ7M729 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.33■□□□□ 0.85
Scn4bQ7M729 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scn4bQ7M729 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scn4bQ7M729 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn4bQ7M729 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scn4bQ7M729 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn4bQ7M729 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.31■□□□□ 0.84
Scn4bQ7M729 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn4bQ7M729 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn4bQ7M729 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn4bQ7M729 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn4bQ7M729 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.29■□□□□ 0.84
Scn4bQ7M729 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn4bQ7M729 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn4bQ7M729 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.27■□□□□ 0.84
Scn4bQ7M729 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Scn4bQ7M729 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn4bQ7M729 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn4bQ7M729 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn4bQ7M729 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn4bQ7M729 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.26■□□□□ 0.83
Scn4bQ7M729 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.26■□□□□ 0.83
Scn4bQ7M729 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn4bQ7M729 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn4bQ7M729 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 196 ms