Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ptch1Q61115 Gm6934-201ENSMUST00000194780 1905 ntBASIC31.09■■■□□ 2.57
Ptch1Q61115 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ptch1Q61115 Gm10493-201ENSMUST00000097270 612 ntBASIC31.09■■■□□ 2.57
Ptch1Q61115 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ptch1Q61115 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ptch1Q61115 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC31.08■■■□□ 2.57
Ptch1Q61115 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ptch1Q61115 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Ptch1Q61115 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Ptch1Q61115 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ptch1Q61115 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ptch1Q61115 CT025689.6-201ENSMUST00000224991 1104 ntBASIC31.07■■■□□ 2.56
Ptch1Q61115 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ptch1Q61115 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ptch1Q61115 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ptch1Q61115 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
Ptch1Q61115 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ptch1Q61115 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ptch1Q61115 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
Ptch1Q61115 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Ptch1Q61115 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ptch1Q61115 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ptch1Q61115 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ptch1Q61115 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC31.05■■■□□ 2.56
Ptch1Q61115 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ptch1Q61115 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ptch1Q61115 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ptch1Q61115 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ptch1Q61115 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC31.03■■■□□ 2.56
Ptch1Q61115 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Ptch1Q61115 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.03■■■□□ 2.56
Ptch1Q61115 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ptch1Q61115 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ptch1Q61115 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ptch1Q61115 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Ptch1Q61115 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Ptch1Q61115 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC31.01■■■□□ 2.55
Ptch1Q61115 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Ptch1Q61115 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ptch1Q61115 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC31.01■■■□□ 2.55
Ptch1Q61115 Gm6085-201ENSMUST00000182774 1470 ntBASIC31.01■■■□□ 2.55
Ptch1Q61115 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ptch1Q61115 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ptch1Q61115 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC31■■■□□ 2.55
Ptch1Q61115 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC31■■■□□ 2.55
Ptch1Q61115 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ptch1Q61115 Gm26833-201ENSMUST00000180899 440 ntBASIC30.99■■■□□ 2.55
Ptch1Q61115 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ptch1Q61115 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC30.99■■■□□ 2.55
Ptch1Q61115 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 AC099934.2-201ENSMUST00000196389 70 ntBASIC30.98■■■□□ 2.55
Ptch1Q61115 AC156953.1-201ENSMUST00000196953 70 ntBASIC30.98■■■□□ 2.55
Ptch1Q61115 AC157822.2-201ENSMUST00000200291 70 ntBASIC30.98■■■□□ 2.55
Ptch1Q61115 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC30.98■■■□□ 2.55
Ptch1Q61115 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptch1Q61115 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ptch1Q61115 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ptch1Q61115 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
Ptch1Q61115 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ptch1Q61115 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ptch1Q61115 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ptch1Q61115 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC30.95■■■□□ 2.54
Ptch1Q61115 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ptch1Q61115 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ptch1Q61115 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ptch1Q61115 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Ptch1Q61115 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ptch1Q61115 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC30.94■■■□□ 2.54
Ptch1Q61115 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.94■■■□□ 2.54
Ptch1Q61115 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ptch1Q61115 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC30.93■■■□□ 2.54
Ptch1Q61115 Gm43060-201ENSMUST00000200621 289 ntBASIC30.93■■■□□ 2.54
Ptch1Q61115 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ptch1Q61115 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
Ptch1Q61115 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Ptch1Q61115 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ptch1Q61115 Gm10129-202ENSMUST00000193100 1316 ntBASIC30.93■■■□□ 2.54
Ptch1Q61115 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ptch1Q61115 Gm42642-201ENSMUST00000200683 355 ntBASIC30.92■■■□□ 2.54
Ptch1Q61115 Spcs1-204ENSMUST00000226782 949 ntBASIC30.92■■■□□ 2.54
Ptch1Q61115 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ptch1Q61115 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC30.92■■■□□ 2.54
Ptch1Q61115 Gm43759-201ENSMUST00000196925 1261 ntBASIC30.91■■■□□ 2.54
Ptch1Q61115 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ptch1Q61115 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Ptch1Q61115 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ptch1Q61115 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC30.91■■■□□ 2.54
Ptch1Q61115 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Ptch1Q61115 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC30.9■■■□□ 2.54
Ptch1Q61115 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms