Protein–RNA interactions for Protein: Q60644

Nr1h2, Oxysterols receptor LXR-beta, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h2Q60644 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.33■□□□□ 0.85
Nr1h2Q60644 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h2Q60644 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Nr1h2Q60644 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.33■□□□□ 0.84
Nr1h2Q60644 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h2Q60644 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h2Q60644 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h2Q60644 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Nr1h2Q60644 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Gm45444-201ENSMUST00000211394 898 ntBASIC20.31■□□□□ 0.84
Nr1h2Q60644 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h2Q60644 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h2Q60644 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.29■□□□□ 0.84
Nr1h2Q60644 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.29■□□□□ 0.84
Nr1h2Q60644 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Nr1h2Q60644 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h2Q60644 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nr1h2Q60644 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h2Q60644 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Gm45102-201ENSMUST00000207427 857 ntBASIC20.27■□□□□ 0.84
Nr1h2Q60644 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.27■□□□□ 0.84
Nr1h2Q60644 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nr1h2Q60644 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nr1h2Q60644 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nr1h2Q60644 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h2Q60644 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.25■□□□□ 0.83
Nr1h2Q60644 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h2Q60644 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Nr1h2Q60644 Gm14117-201ENSMUST00000122417 843 ntBASIC20.25■□□□□ 0.83
Nr1h2Q60644 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nr1h2Q60644 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.25■□□□□ 0.83
Nr1h2Q60644 Iqck-206ENSMUST00000208658 2891 ntBASIC20.25■□□□□ 0.83
Nr1h2Q60644 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h2Q60644 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h2Q60644 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.24■□□□□ 0.83
Nr1h2Q60644 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h2Q60644 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.23■□□□□ 0.83
Nr1h2Q60644 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nr1h2Q60644 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.23■□□□□ 0.83
Nr1h2Q60644 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nr1h2Q60644 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms