Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.21■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.21■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gm11599-201ENSMUST00000118720 878 ntBASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Iqck-206ENSMUST00000208658 2891 ntBASIC16.16■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-1-dv6-1Q5R1D2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms