Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1d1Q3UV55 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1d1Q3UV55 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nr1d1Q3UV55 Gm10420-201ENSMUST00000121713 882 ntBASIC21.92■■□□□ 1.1
Nr1d1Q3UV55 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.92■■□□□ 1.1
Nr1d1Q3UV55 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1d1Q3UV55 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1d1Q3UV55 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1d1Q3UV55 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1d1Q3UV55 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1d1Q3UV55 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1d1Q3UV55 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1d1Q3UV55 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Nr1d1Q3UV55 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.89■■□□□ 1.1
Nr1d1Q3UV55 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Nr1d1Q3UV55 Gm9812-201ENSMUST00000061934 968 ntBASIC21.89■■□□□ 1.09
Nr1d1Q3UV55 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.89■■□□□ 1.09
Nr1d1Q3UV55 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1d1Q3UV55 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1d1Q3UV55 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.87■■□□□ 1.09
Nr1d1Q3UV55 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Iqck-206ENSMUST00000208658 2891 ntBASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.86■■□□□ 1.09
Nr1d1Q3UV55 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1d1Q3UV55 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Gm5921-201ENSMUST00000075898 882 ntBASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1d1Q3UV55 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1d1Q3UV55 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1d1Q3UV55 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1d1Q3UV55 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.82■■□□□ 1.08
Nr1d1Q3UV55 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1d1Q3UV55 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr1d1Q3UV55 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1d1Q3UV55 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms