Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shisa3Q3UPR0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shisa3Q3UPR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shisa3Q3UPR0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shisa3Q3UPR0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shisa3Q3UPR0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Shisa3Q3UPR0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Shisa3Q3UPR0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Gm12366-201ENSMUST00000121722 873 ntBASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Gm5786-201ENSMUST00000085368 882 ntBASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Shisa3Q3UPR0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shisa3Q3UPR0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shisa3Q3UPR0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shisa3Q3UPR0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Gm44428-201ENSMUST00000204474 874 ntBASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shisa3Q3UPR0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Gm14523-201ENSMUST00000117260 558 ntBASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa3Q3UPR0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa3Q3UPR0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa3Q3UPR0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.92■□□□□ 0.46
Shisa3Q3UPR0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms