Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrk1Q3UHC2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lrrk1Q3UHC2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
Lrrk1Q3UHC2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.54■□□□□ 0.72
Lrrk1Q3UHC2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrk1Q3UHC2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrk1Q3UHC2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrk1Q3UHC2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrk1Q3UHC2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lrrk1Q3UHC2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.52■□□□□ 0.72
Lrrk1Q3UHC2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lrrk1Q3UHC2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrk1Q3UHC2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrk1Q3UHC2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lrrk1Q3UHC2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrk1Q3UHC2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.5■□□□□ 0.71
Lrrk1Q3UHC2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Etf1-202ENSMUST00000180351 108 ntBASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrk1Q3UHC2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrk1Q3UHC2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrk1Q3UHC2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.48■□□□□ 0.71
Lrrk1Q3UHC2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrk1Q3UHC2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.48■□□□□ 0.71
Lrrk1Q3UHC2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrk1Q3UHC2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrk1Q3UHC2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrk1Q3UHC2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.44■□□□□ 0.7
Lrrk1Q3UHC2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.44■□□□□ 0.7
Lrrk1Q3UHC2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrk1Q3UHC2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.44■□□□□ 0.7
Lrrk1Q3UHC2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrk1Q3UHC2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Gm13241-201ENSMUST00000094493 780 ntBASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk1Q3UHC2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms