Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Gm8520-201ENSMUST00000186517 868 ntBASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ush2AQ2QI47 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Gm4968-201ENSMUST00000071458 858 ntBASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Ush2AQ2QI47 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ush2AQ2QI47 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Gm13168-201ENSMUST00000121771 632 ntBASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ush2AQ2QI47 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ush2AQ2QI47 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.63□□□□□ -0.55
Ush2AQ2QI47 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ush2AQ2QI47 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ush2AQ2QI47 AC153524.1-201ENSMUST00000220436 1935 ntBASIC11.63□□□□□ -0.55
Ush2AQ2QI47 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.63□□□□□ -0.55
Ush2AQ2QI47 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ush2AQ2QI47 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Fezf2-202ENSMUST00000224023 1917 ntBASIC11.61□□□□□ -0.55
Ush2AQ2QI47 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ush2AQ2QI47 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ush2AQ2QI47 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.58□□□□□ -0.55
Ush2AQ2QI47 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.58□□□□□ -0.55
Ush2AQ2QI47 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.58□□□□□ -0.55
Ush2AQ2QI47 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ush2AQ2QI47 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ush2AQ2QI47 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.58□□□□□ -0.56
Ush2AQ2QI47 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ush2AQ2QI47 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ush2AQ2QI47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms