Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.83■□□□□ 0.93
Ldb1P70662 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb1P70662 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ldb1P70662 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ldb1P70662 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.83■□□□□ 0.92
Ldb1P70662 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ldb1P70662 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb1P70662 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.82■□□□□ 0.92
Ldb1P70662 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.82■□□□□ 0.92
Ldb1P70662 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ldb1P70662 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Ldb1P70662 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb1P70662 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb1P70662 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ldb1P70662 Gm43566-201ENSMUST00000196851 808 ntBASIC20.81■□□□□ 0.92
Ldb1P70662 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb1P70662 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb1P70662 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.8■□□□□ 0.92
Ldb1P70662 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb1P70662 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb1P70662 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ldb1P70662 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb1P70662 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ldb1P70662 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb1P70662 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.8■□□□□ 0.92
Ldb1P70662 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.8■□□□□ 0.92
Ldb1P70662 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.79■□□□□ 0.92
Ldb1P70662 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb1P70662 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Ldb1P70662 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb1P70662 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb1P70662 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb1P70662 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb1P70662 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb1P70662 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb1P70662 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb1P70662 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb1P70662 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb1P70662 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb1P70662 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb1P70662 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb1P70662 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb1P70662 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ldb1P70662 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb1P70662 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb1P70662 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb1P70662 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb1P70662 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ldb1P70662 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.75■□□□□ 0.91
Ldb1P70662 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ldb1P70662 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ldb1P70662 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.75■□□□□ 0.91
Ldb1P70662 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ldb1P70662 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.75■□□□□ 0.91
Ldb1P70662 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb1P70662 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb1P70662 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb1P70662 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb1P70662 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ldb1P70662 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ldb1P70662 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb1P70662 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb1P70662 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb1P70662 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.73■□□□□ 0.91
Ldb1P70662 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ldb1P70662 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.73■□□□□ 0.91
Ldb1P70662 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.73■□□□□ 0.91
Ldb1P70662 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb1P70662 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ldb1P70662 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Ldb1P70662 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb1P70662 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ldb1P70662 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ldb1P70662 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb1P70662 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ldb1P70662 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms