Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h3aP68433 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h3aP68433 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h3aP68433 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h3aP68433 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Hist1h3aP68433 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
Hist1h3aP68433 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.26■□□□□ 0.51
Hist1h3aP68433 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3aP68433 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.25■□□□□ 0.51
Hist1h3aP68433 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3aP68433 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hist1h3aP68433 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3aP68433 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3aP68433 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hist1h3aP68433 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h3aP68433 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h3aP68433 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3aP68433 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3aP68433 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3aP68433 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3aP68433 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.19■□□□□ 0.5
Hist1h3aP68433 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3aP68433 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3aP68433 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.19■□□□□ 0.5
Hist1h3aP68433 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3aP68433 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3aP68433 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3aP68433 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3aP68433 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.17■□□□□ 0.5
Hist1h3aP68433 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3aP68433 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hist1h3aP68433 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms