Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lhx1P63006 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
Lhx1P63006 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lhx1P63006 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.61■□□□□ 0.89
Lhx1P63006 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx1P63006 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lhx1P63006 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx1P63006 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Lhx1P63006 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.59■□□□□ 0.89
Lhx1P63006 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx1P63006 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Lhx1P63006 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Lhx1P63006 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx1P63006 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx1P63006 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lhx1P63006 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx1P63006 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx1P63006 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx1P63006 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx1P63006 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Lhx1P63006 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx1P63006 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.57■□□□□ 0.88
Lhx1P63006 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lhx1P63006 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lhx1P63006 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.56■□□□□ 0.88
Lhx1P63006 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx1P63006 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx1P63006 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx1P63006 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lhx1P63006 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx1P63006 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx1P63006 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx1P63006 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx1P63006 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx1P63006 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.54■□□□□ 0.88
Lhx1P63006 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx1P63006 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx1P63006 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.53■□□□□ 0.88
Lhx1P63006 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.53■□□□□ 0.88
Lhx1P63006 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx1P63006 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx1P63006 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx1P63006 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx1P63006 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.52■□□□□ 0.88
Lhx1P63006 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx1P63006 Gm12922-201ENSMUST00000120626 809 ntBASIC20.52■□□□□ 0.88
Lhx1P63006 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.52■□□□□ 0.88
Lhx1P63006 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.52■□□□□ 0.88
Lhx1P63006 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lhx1P63006 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx1P63006 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lhx1P63006 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx1P63006 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.51■□□□□ 0.87
Lhx1P63006 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx1P63006 Gm9847-201ENSMUST00000052528 599 ntBASIC20.51■□□□□ 0.87
Lhx1P63006 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx1P63006 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx1P63006 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lhx1P63006 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx1P63006 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx1P63006 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx1P63006 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx1P63006 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx1P63006 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.5■□□□□ 0.87
Lhx1P63006 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lhx1P63006 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.49■□□□□ 0.87
Lhx1P63006 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx1P63006 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx1P63006 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.49■□□□□ 0.87
Lhx1P63006 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx1P63006 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx1P63006 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms