Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm6P62313 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lsm6P62313 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Lsm6P62313 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm6P62313 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.35■□□□□ 0.53
Lsm6P62313 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm6P62313 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm6P62313 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm6P62313 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.35■□□□□ 0.53
Lsm6P62313 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsm6P62313 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.34■□□□□ 0.53
Lsm6P62313 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm6P62313 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.34■□□□□ 0.53
Lsm6P62313 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lsm6P62313 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm6P62313 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm6P62313 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm6P62313 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lsm6P62313 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lsm6P62313 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm6P62313 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm6P62313 Gm13238-201ENSMUST00000117655 780 ntBASIC18.32■□□□□ 0.52
Lsm6P62313 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm6P62313 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm6P62313 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Lsm6P62313 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.31■□□□□ 0.52
Lsm6P62313 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.31■□□□□ 0.52
Lsm6P62313 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm6P62313 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Lsm6P62313 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lsm6P62313 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.3■□□□□ 0.52
Lsm6P62313 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lsm6P62313 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm6P62313 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.29■□□□□ 0.52
Lsm6P62313 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm6P62313 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.29■□□□□ 0.52
Lsm6P62313 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lsm6P62313 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm6P62313 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.28■□□□□ 0.52
Lsm6P62313 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm6P62313 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Lsm6P62313 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm6P62313 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm6P62313 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm6P62313 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm6P62313 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Lsm6P62313 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Lsm6P62313 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm6P62313 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm6P62313 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.27■□□□□ 0.52
Lsm6P62313 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm6P62313 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm6P62313 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm6P62313 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm6P62313 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.27■□□□□ 0.51
Lsm6P62313 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Lsm6P62313 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm6P62313 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm6P62313 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm6P62313 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.26■□□□□ 0.51
Lsm6P62313 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Lsm6P62313 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm6P62313 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm6P62313 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm6P62313 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm6P62313 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm6P62313 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm6P62313 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lsm6P62313 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Lsm6P62313 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Lsm6P62313 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.24■□□□□ 0.51
Lsm6P62313 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Lsm6P62313 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.24■□□□□ 0.51
Lsm6P62313 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms