Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Mmp20P57748 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Mmp20P57748 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp20P57748 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.25■■□□□ 1.47
Mmp20P57748 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp20P57748 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp20P57748 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp20P57748 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
Mmp20P57748 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.24■■□□□ 1.47
Mmp20P57748 Gm43017-201ENSMUST00000198296 752 ntBASIC24.24■■□□□ 1.47
Mmp20P57748 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp20P57748 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp20P57748 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Mmp20P57748 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Mmp20P57748 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.23■■□□□ 1.47
Mmp20P57748 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.23■■□□□ 1.47
Mmp20P57748 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Mmp20P57748 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
Mmp20P57748 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Mmp20P57748 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Mmp20P57748 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Mmp20P57748 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Mmp20P57748 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Mmp20P57748 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.22■■□□□ 1.47
Mmp20P57748 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Mmp20P57748 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Mmp20P57748 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Mmp20P57748 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Mmp20P57748 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.22■■□□□ 1.47
Mmp20P57748 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.22■■□□□ 1.47
Mmp20P57748 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Mmp20P57748 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
Mmp20P57748 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.21■■□□□ 1.47
Mmp20P57748 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Mmp20P57748 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Mmp20P57748 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Mmp20P57748 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Mmp20P57748 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Mmp20P57748 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Mmp20P57748 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.19■■□□□ 1.46
Mmp20P57748 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Mmp20P57748 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Mmp20P57748 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Mmp20P57748 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Mmp20P57748 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Mmp20P57748 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Mmp20P57748 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Mmp20P57748 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.18■■□□□ 1.46
Mmp20P57748 Gm8493-201ENSMUST00000196881 489 ntBASIC24.18■■□□□ 1.46
Mmp20P57748 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Mmp20P57748 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Mmp20P57748 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Mmp20P57748 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.17■■□□□ 1.46
Mmp20P57748 Gm7143-201ENSMUST00000222811 859 ntBASIC24.17■■□□□ 1.46
Mmp20P57748 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.17■■□□□ 1.46
Mmp20P57748 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mmp20P57748 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Mmp20P57748 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Mmp20P57748 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Mmp20P57748 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Mmp20P57748 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Mmp20P57748 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
Mmp20P57748 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.15■■□□□ 1.46
Mmp20P57748 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Mmp20P57748 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Mmp20P57748 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.46
Mmp20P57748 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.14■■□□□ 1.45
Mmp20P57748 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.14■■□□□ 1.45
Mmp20P57748 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Mmp20P57748 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mmp20P57748 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Mmp20P57748 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.13■■□□□ 1.45
Mmp20P57748 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
Mmp20P57748 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.13■■□□□ 1.45
Mmp20P57748 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Mmp20P57748 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mmp20P57748 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Mmp20P57748 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mmp20P57748 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Mmp20P57748 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Mmp20P57748 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.12■■□□□ 1.45
Mmp20P57748 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Mmp20P57748 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.12■■□□□ 1.45
Mmp20P57748 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Mmp20P57748 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Mmp20P57748 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms