Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Sox3P53784 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sox3P53784 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox3P53784 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox3P53784 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sox3P53784 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox3P53784 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox3P53784 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox3P53784 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox3P53784 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox3P53784 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox3P53784 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.86■□□□□ 0.77
Sox3P53784 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.86■□□□□ 0.77
Sox3P53784 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox3P53784 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.85■□□□□ 0.77
Sox3P53784 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.85■□□□□ 0.77
Sox3P53784 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Sox3P53784 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sox3P53784 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox3P53784 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox3P53784 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Sox3P53784 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox3P53784 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sox3P53784 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox3P53784 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox3P53784 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox3P53784 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sox3P53784 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sox3P53784 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.83■□□□□ 0.77
Sox3P53784 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox3P53784 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox3P53784 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox3P53784 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox3P53784 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox3P53784 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox3P53784 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.82■□□□□ 0.76
Sox3P53784 Gm29257-201ENSMUST00000186115 639 ntBASIC19.82■□□□□ 0.76
Sox3P53784 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sox3P53784 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox3P53784 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sox3P53784 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox3P53784 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.81■□□□□ 0.76
Sox3P53784 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox3P53784 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Sox3P53784 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sox3P53784 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sox3P53784 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox3P53784 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Sox3P53784 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.8■□□□□ 0.76
Sox3P53784 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox3P53784 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox3P53784 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox3P53784 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.79■□□□□ 0.76
Sox3P53784 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox3P53784 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.78■□□□□ 0.76
Sox3P53784 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sox3P53784 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sox3P53784 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.78■□□□□ 0.76
Sox3P53784 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Sox3P53784 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sox3P53784 Golgb1-201ENSMUST00000023534 498 ntBASIC19.78■□□□□ 0.76
Sox3P53784 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox3P53784 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox3P53784 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox3P53784 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sox3P53784 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox3P53784 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms