Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp2P33434 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp2P33434 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mmp2P33434 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp2P33434 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp2P33434 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Mmp2P33434 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.47■□□□□ 0.71
Mmp2P33434 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp2P33434 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.47■□□□□ 0.71
Mmp2P33434 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.47■□□□□ 0.71
Mmp2P33434 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp2P33434 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mmp2P33434 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp2P33434 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp2P33434 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Mmp2P33434 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp2P33434 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp2P33434 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
Mmp2P33434 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.46■□□□□ 0.71
Mmp2P33434 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.45■□□□□ 0.7
Mmp2P33434 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp2P33434 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp2P33434 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp2P33434 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp2P33434 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Mmp2P33434 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Mmp2P33434 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp2P33434 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp2P33434 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.43■□□□□ 0.7
Mmp2P33434 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
Mmp2P33434 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 Rps24-207ENSMUST00000224568 714 ntBASIC19.43■□□□□ 0.7
Mmp2P33434 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Mmp2P33434 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.43■□□□□ 0.7
Mmp2P33434 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp2P33434 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp2P33434 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp2P33434 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp2P33434 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Mmp2P33434 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.42■□□□□ 0.7
Mmp2P33434 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp2P33434 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.41■□□□□ 0.7
Mmp2P33434 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.41■□□□□ 0.7
Mmp2P33434 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.41■□□□□ 0.7
Mmp2P33434 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp2P33434 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.4■□□□□ 0.7
Mmp2P33434 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.4■□□□□ 0.7
Mmp2P33434 Gm10399-202ENSMUST00000202768 748 ntBASIC19.4■□□□□ 0.7
Mmp2P33434 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.4■□□□□ 0.7
Mmp2P33434 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp2P33434 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp2P33434 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp2P33434 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp2P33434 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp2P33434 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Mmp2P33434 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.39■□□□□ 0.69
Mmp2P33434 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.39■□□□□ 0.69
Mmp2P33434 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp2P33434 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp2P33434 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp2P33434 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp2P33434 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.38■□□□□ 0.69
Mmp2P33434 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp2P33434 Gm9959-201ENSMUST00000068277 390 ntBASIC19.38■□□□□ 0.69
Mmp2P33434 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp2P33434 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.37■□□□□ 0.69
Mmp2P33434 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp2P33434 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp2P33434 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.36■□□□□ 0.69
Mmp2P33434 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp2P33434 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp2P33434 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.36■□□□□ 0.69
Mmp2P33434 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms