Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Slc6a1P31648 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a1P31648 Gm11175-201ENSMUST00000116172 543 ntBASIC17.87■□□□□ 0.45
Slc6a1P31648 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a1P31648 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a1P31648 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc6a1P31648 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a1P31648 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.84■□□□□ 0.45
Slc6a1P31648 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Slc6a1P31648 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a1P31648 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Slc6a1P31648 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.83■□□□□ 0.45
Slc6a1P31648 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc6a1P31648 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Slc6a1P31648 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a1P31648 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slc6a1P31648 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.82■□□□□ 0.44
Slc6a1P31648 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a1P31648 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Gm11687-201ENSMUST00000118911 886 ntBASIC17.82■□□□□ 0.44
Slc6a1P31648 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Gm9806-201ENSMUST00000051080 552 ntBASIC17.82■□□□□ 0.44
Slc6a1P31648 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.82■□□□□ 0.44
Slc6a1P31648 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a1P31648 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc6a1P31648 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc6a1P31648 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.81■□□□□ 0.44
Slc6a1P31648 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc6a1P31648 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a1P31648 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Slc6a1P31648 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a1P31648 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc6a1P31648 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc6a1P31648 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a1P31648 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
Slc6a1P31648 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a1P31648 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Slc6a1P31648 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.79■□□□□ 0.44
Slc6a1P31648 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a1P31648 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.79■□□□□ 0.44
Slc6a1P31648 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a1P31648 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a1P31648 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a1P31648 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a1P31648 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a1P31648 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a1P31648 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a1P31648 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms