Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl6P27784 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl6P27784 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl6P27784 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.23■□□□□ 0.19
Ccl6P27784 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccl6P27784 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccl6P27784 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl6P27784 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccl6P27784 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl6P27784 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.22■□□□□ 0.19
Ccl6P27784 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl6P27784 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccl6P27784 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccl6P27784 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccl6P27784 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl6P27784 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl6P27784 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.22■□□□□ 0.19
Ccl6P27784 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl6P27784 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl6P27784 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccl6P27784 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.22■□□□□ 0.19
Ccl6P27784 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccl6P27784 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl6P27784 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Ccl6P27784 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ccl6P27784 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Gm13238-201ENSMUST00000117655 780 ntBASIC16.2■□□□□ 0.18
Ccl6P27784 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccl6P27784 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl6P27784 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccl6P27784 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Ccl6P27784 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccl6P27784 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl6P27784 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccl6P27784 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Gm5921-201ENSMUST00000075898 882 ntBASIC16.18■□□□□ 0.18
Ccl6P27784 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl6P27784 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ccl6P27784 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl6P27784 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl6P27784 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ccl6P27784 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl6P27784 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.16■□□□□ 0.18
Ccl6P27784 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Gm45444-201ENSMUST00000211394 898 ntBASIC16.16■□□□□ 0.18
Ccl6P27784 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccl6P27784 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccl6P27784 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ccl6P27784 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.16■□□□□ 0.18
Ccl6P27784 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl6P27784 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccl6P27784 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ccl6P27784 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl6P27784 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccl6P27784 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccl6P27784 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl6P27784 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl6P27784 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl6P27784 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms