Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.99■□□□□ 0.63
Cd40P27512 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cd40P27512 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.98■□□□□ 0.63
Cd40P27512 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40P27512 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.98■□□□□ 0.63
Cd40P27512 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.97■□□□□ 0.63
Cd40P27512 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40P27512 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd40P27512 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40P27512 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cd40P27512 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40P27512 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40P27512 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40P27512 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40P27512 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.95■□□□□ 0.62
Cd40P27512 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40P27512 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40P27512 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Cd40P27512 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.94■□□□□ 0.62
Cd40P27512 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cd40P27512 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cd40P27512 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cd40P27512 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40P27512 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cd40P27512 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Cd40P27512 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40P27512 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40P27512 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cd40P27512 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cd40P27512 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.92■□□□□ 0.62
Cd40P27512 Gm40881-201ENSMUST00000223397 166 ntBASIC18.92■□□□□ 0.62
Cd40P27512 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.92■□□□□ 0.62
Cd40P27512 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40P27512 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cd40P27512 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cd40P27512 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd40P27512 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cd40P27512 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd40P27512 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd40P27512 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.91■□□□□ 0.62
Cd40P27512 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.9■□□□□ 0.62
Cd40P27512 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
Cd40P27512 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cd40P27512 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.9■□□□□ 0.62
Cd40P27512 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd40P27512 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cd40P27512 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cd40P27512 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.89■□□□□ 0.61
Cd40P27512 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.89■□□□□ 0.61
Cd40P27512 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cd40P27512 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.89■□□□□ 0.61
Cd40P27512 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd40P27512 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.88■□□□□ 0.61
Cd40P27512 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.88■□□□□ 0.61
Cd40P27512 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms