Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
Pde6bP23440 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pde6bP23440 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pde6bP23440 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pde6bP23440 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.72■■□□□ 1.23
Pde6bP23440 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.72■■□□□ 1.23
Pde6bP23440 Gm27454-201ENSMUST00000185090 204 ntBASIC22.72■■□□□ 1.23
Pde6bP23440 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Pde6bP23440 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Pde6bP23440 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pde6bP23440 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pde6bP23440 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pde6bP23440 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.71■■□□□ 1.23
Pde6bP23440 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.71■■□□□ 1.23
Pde6bP23440 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pde6bP23440 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pde6bP23440 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.7■■□□□ 1.22
Pde6bP23440 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pde6bP23440 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pde6bP23440 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pde6bP23440 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pde6bP23440 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Pde6bP23440 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pde6bP23440 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pde6bP23440 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pde6bP23440 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pde6bP23440 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.68■■□□□ 1.22
Pde6bP23440 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pde6bP23440 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pde6bP23440 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.68■■□□□ 1.22
Pde6bP23440 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pde6bP23440 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pde6bP23440 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pde6bP23440 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pde6bP23440 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.67■■□□□ 1.22
Pde6bP23440 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.67■■□□□ 1.22
Pde6bP23440 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.67■■□□□ 1.22
Pde6bP23440 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pde6bP23440 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pde6bP23440 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pde6bP23440 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pde6bP23440 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pde6bP23440 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pde6bP23440 Gm45417-201ENSMUST00000209533 758 ntBASIC22.65■■□□□ 1.22
Pde6bP23440 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pde6bP23440 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pde6bP23440 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pde6bP23440 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.64■■□□□ 1.21
Pde6bP23440 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Pde6bP23440 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pde6bP23440 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pde6bP23440 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.64■■□□□ 1.21
Pde6bP23440 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pde6bP23440 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pde6bP23440 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
Pde6bP23440 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.63■■□□□ 1.21
Pde6bP23440 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pde6bP23440 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pde6bP23440 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Pde6bP23440 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
Pde6bP23440 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.61■■□□□ 1.21
Pde6bP23440 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pde6bP23440 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 Serp2-204ENSMUST00000228055 705 ntBASIC22.6■■□□□ 1.21
Pde6bP23440 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pde6bP23440 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pde6bP23440 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.59■■□□□ 1.21
Pde6bP23440 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pde6bP23440 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Pde6bP23440 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Pde6bP23440 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms