Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf9P20334 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf9P20334 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf9P20334 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Gm12922-201ENSMUST00000120626 809 ntBASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf9P20334 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf9P20334 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf9P20334 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf9P20334 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf9P20334 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf9P20334 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Tnfrsf9P20334 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf9P20334 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf9P20334 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf9P20334 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf9P20334 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.74■□□□□ 0.27
Tnfrsf9P20334 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf9P20334 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms