Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TP20293 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TP20293 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TP20293 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TP20293 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TP20293 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TP20293 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TP20293 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TP20293 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.57■□□□□ 0.72
TP20293 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.57■□□□□ 0.72
TP20293 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.57■□□□□ 0.72
TP20293 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TP20293 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TP20293 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TP20293 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TP20293 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TP20293 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TP20293 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.55■□□□□ 0.72
TP20293 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.55■□□□□ 0.72
TP20293 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TP20293 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TP20293 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TP20293 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TP20293 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.54■□□□□ 0.72
TP20293 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TP20293 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TP20293 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TP20293 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.54■□□□□ 0.72
TP20293 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TP20293 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.53■□□□□ 0.72
TP20293 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TP20293 Gm5812-201ENSMUST00000061073 957 ntBASIC19.53■□□□□ 0.72
TP20293 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TP20293 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TP20293 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TP20293 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TP20293 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TP20293 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TP20293 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.52■□□□□ 0.72
TP20293 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.52■□□□□ 0.71
TP20293 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TP20293 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TP20293 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TP20293 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TP20293 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.51■□□□□ 0.71
TP20293 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TP20293 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TP20293 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TP20293 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TP20293 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.5■□□□□ 0.71
TP20293 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TP20293 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TP20293 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TP20293 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TP20293 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TP20293 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TP20293 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TP20293 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TP20293 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TP20293 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
TP20293 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TP20293 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TP20293 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.48■□□□□ 0.71
TP20293 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TP20293 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TP20293 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TP20293 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TP20293 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TP20293 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.48■□□□□ 0.71
TP20293 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms